Table 4. The variation effects by region of Korean native ducks confirmed through SnpEff software

Group No. of effects by region (%)
Upstream 5’UTR Exon Intron 3’UTR Downstream Intergenic
Colored 1,693,903 (9.99) 85,502 (0.50) 392,666 (2.32) 11,314,645 (66.79) 281,306 (1.66) 1,632,471 (9.63) 1,500,783 (8.86)
White 1,666,497 (9.94) 82,721 (0.49) 383,796 (2.29) 11,198,150 (66.81) 276,501 (1.65) 1,615,519 (9.64) 1,499,624 (8.95)
Common 878,877 (10.19) 46,249 (0.54) 202,041 (2.35) 5,715,304 (66.30) 141,990 (1.65) 844,124 (9.79) 770,418 (8.94)